When building in deploy I see many warnings like these in the build log:

C:/PROGRA~1/MICROS~1.0/VC/bin/cl -nologo -MT /D _STATIC_CPPLIB -W3 -O2 -D "WIN32" -D "NDEBUG" -D "_WINDOWS" -D "_MBCS" -D "_USRDLL" -D "_ATL_STATIC_REGISTRY" -I"g:/tbell/6523947/build/windows-i586/tmp/deploy/javaws/activex" -Fp"g:/tbell/6523947/build/windows-i586/tmp/deploy/javaws/activex\wsdetect.pch" -Yc"stdafx.h" -Fo"g:/tbell/6523947/build/windows-i586/tmp/deploy/javaws/jawsobj\\" -Fd"g:/tbell/6523947/build/windows-i586/tmp/deploy/javaws/activex\\" -FD -c ../../../src/javaws/win32/activex/StdAfx.cpp
StdAfx.cpp
statreg.cpp is obsolete. Please remove it from your project.
atlimpl.cpp is obsolete. Please remove it from your project.


Affects the following StdAfx.cpp or stdafx.cpp files:

cd <wherever>/deploy/src
% find . -name StdAfx.cpp -print
./javaws/win32/activex/StdAfx.cpp
./plugin/share/adapter/ns4/StdAfx.cpp
./plugin/share/adapter/oji/StdAfx.cpp
./plugin/win32/com/common/StdAfx.cpp
./plugin/win32/com/dispatch/StdAfx.cpp
./plugin/win32/nsstub/StdAfx.cpp
./plugin/win32/regutils/StdAfx.cpp
./plugin/win32/toolkit/mozilla/StdAfx.cpp
./plugin/win32/toolkit/iexplorer/StdAfx.cpp
./plugin/win32/jupdate/checker/StdAfx.cpp
./plugin/win32/jupdate/jureg/StdAfx.cpp
./plugin/win32/jupdate/scheduler/StdAfx.cpp
./plugin/win32/regutilsmsi/StdAfx.cpp
./plugin/win32/eula/StdAfx.cpp
./plugin/win32/controlpanel/cplexec/StdAfx.cpp
./plugin/win32/jinstall/win32/StdAfx.cpp
./plugin/win32/ssv/StdAfx.cpp
./plugin/win32/nscore/StdAfx.cpp
% find . -name stdafx.cpp -print
./common/windows/native/stdafx.cpp
./plugin/win32/jpishare/stdafx.cpp