If there is a XML document that looks like this :
===============
<?xml version="1.0" standalone="no"?>
<!DOCTYPE document PUBLIC "-//mkrishna mohan//DTD//music pub//EN/"
                "http://sardinia.sfbay:8080/JAXPREP/publishers.dtd">
<document>
        Publishers of the Music of New York Women Composers
        <title>The Publishers </title>
        <publisher>
                <name>ACA</name>
                <email>###@###.### </email>
                <homepage>http://www.composers.com/&lt;/homepage>
                <address>
                        <street>170 West 74th St.</street>
                        <city>NY</city>
                        <state>NY</state>
                        <zip>10023</zip>
                </address>
                <voice>212-362-8900</voice>
                <fax>212-874-8605</fax>
                <!-- This comment is for LexicalHandler -->
                &familytree;
        </publisher>
</document>
==============
If such an XML file is converted in to Document object and then transformed into a StreamResult , then the nested elements within the <publisher> element are not reflected in the output.

Attached are the XML file.java program for the test as well as the Golden file and the actual output