When running the following command:

"/Library/Java/JavaVirtualMachines/jdk1.8.0.jdk/Contents/Home/bin/javafxpackager" "-deploy" "-verbose" "-outdir" "${HOME}" "-outfile" "test" "-native" "image" "-BfxPackaging=true" "-BmainJar=${HOME}/jars/testFxAppWithUtil.jar" "-Bclasspath=${HOME}/jars/testFxAppWithUtil.jar:${HOME}/jars/Util.jar" "-srcfiles" "${HOME}/jars/testFxAppWithUtil.jar:${HOME}/jars/Util.jar" "-appclass" "testapp.App1" -name "App1" "-srcdir" "${HOME}/jars"

the "bundles/App1.app" folder is created in home dir.
When we launch ./bundles/App1.app/Contents/MacOS/App1
we get an exception:

java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at com.sun.javafx.application.LauncherImpl.launchApplicationWithArgs(LauncherImpl.java:367)
at com.sun.javafx.application.LauncherImpl.launchApplication(LauncherImpl.java:305)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at sun.launcher.LauncherHelper$FXHelper.main(LauncherHelper.java:767)
Caused by: java.lang.RuntimeException: Exception in Application start method
at com.sun.javafx.application.LauncherImpl.launchApplication1(LauncherImpl.java:894)
at com.sun.javafx.application.LauncherImpl.access$000(LauncherImpl.java:56)
at com.sun.javafx.application.LauncherImpl$1.run(LauncherImpl.java:158)
at java.lang.Thread.run(Thread.java:744)
Caused by: java.lang.NoClassDefFoundError: testapp/util/Util
at testapp.App1$1.handle(App1.java:37)
at testapp.App1$1.handle(App1.java:26)
at com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(CompositeEventHandler.java:86)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:238)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:191)
at com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(CompositeEventDispatcher.java:59)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:58)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.EventUtil.fireEventImpl(EventUtil.java:74)
at com.sun.javafx.event.EventUtil.fireEvent(EventUtil.java:54)
at javafx.event.Event.fireEvent(Event.java:204)
at javafx.stage.Window.fireEvent(Window.java:1024)
at javafx.stage.Window$9.invalidated(Window.java:774)
at javafx.beans.property.BooleanPropertyBase.markInvalid(BooleanPropertyBase.java:109)
at javafx.beans.property.BooleanPropertyBase.set(BooleanPropertyBase.java:143)
at javafx.stage.Window.setShowing(Window.java:826)
at javafx.stage.Window.show(Window.java:841)
at javafx.stage.Stage.show(Stage.java:247)
at testapp.App1.start(App1.java:44)
at com.sun.javafx.application.LauncherImpl$8.run(LauncherImpl.java:837)
at com.sun.javafx.application.PlatformImpl$7.run(PlatformImpl.java:335)
at com.sun.javafx.application.PlatformImpl$6$1.run(PlatformImpl.java:301)
at com.sun.javafx.application.PlatformImpl$6$1.run(PlatformImpl.java:298)
at java.security.AccessController.doPrivileged(Native Method)
at com.sun.javafx.application.PlatformImpl$6.run(PlatformImpl.java:298)
at com.sun.glass.ui.InvokeLaterDispatcher$Future.run(InvokeLaterDispatcher.java:95)
Caused by: java.lang.ClassNotFoundException: testapp.util.Util
at java.net.URLClassLoader$1.run(URLClassLoader.java:372)
at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:360)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)