The test JavaFX/JFX006-001 check the files contained in javafx_samples-2_0_3-windows-i586.zip.
1. Unzip javafx_samples-2_0_3-windows-i586.zip
2. Compare the filelists between actual and expected

The following files are not contained in actual javafx_samples-2_0_3-windows-i586.zip but in the expected filelist of test case.

src/BrickBreaker/nbproject/jfx-impl-callbacks.xmlinc
src/BrickBreaker/nbproject/jfx-impl-parameters.xmlinc
src/BrickBreaker/nbproject/jfx-impl-platform.xmlinc
src/DataApp/DataAppClient/nbproject/jfx-impl-callbacks.xmlinc
src/DataApp/DataAppClient/nbproject/jfx-impl-parameters.xmlinc
src/DataApp/DataAppClient/nbproject/jfx-impl-platform.xmlinc
src/DataApp/DataAppPreloader/nbproject/jfx-impl-callbacks.xmlinc
src/DataApp/DataAppPreloader/nbproject/jfx-impl-parameters.xmlinc
src/DataApp/DataAppPreloader/nbproject/jfx-impl-platform.xmlinc
src/Ensemble/manifest.mf 309,311d300
src/Ensemble/nbproject/jfx-impl-callbacks.xmlinc
src/Ensemble/nbproject/jfx-impl-parameters.xmlinc
src/Ensemble/nbproject/jfx-impl-platform.xmlinc
src/FXML-LoginDemo/nbproject/jfx-impl-callbacks.xmlinc
src/FXML-LoginDemo/nbproject/jfx-impl-parameters.xmlinc
src/FXML-LoginDemo/nbproject/jfx-impl-platform.xmlinc

Please verify if these files are missing or are expected to be deleted.