JavaDoc generated documentation contains a number of standard resources, including files with `.svg`, `.js` and `.css` extension. Most of these files are currently copied to the top level directory of the generated API docs. Generated documentation contains directories called `script-dir` and `resources`, and these should be used for the above-mentioned files.

Since `resources` is a valid identifier name in Java, that directory should also be renamed to something that cannot conflict with module or package names, such as `resource-dir` or `resource-files`.