Following what is said in the Description of the DTL-4928 you get the repaint issue.
Adding option -Dprism.dirtyopts=false is enough to silence this issue : this is generally the sign something's wrong within FX platform hence this defect.

Be careful that when following steps of DTL-4928 you must run a SceneBuilder where assertions are enabled: this is the case by default when running SB from a repository but this is not the case if you run SB from a public bundle.